Biological Databases

• • Pubmed Citations for biomedical literature
  • PDB Worldwide protein databank
  • BLAST Basic local alignment search tool
  • Clustal Omega Multiple sequence alignment program
  • ESPript 3.0 Renders sequence similarities and secondary structure information from aligned sequences
  • ProtParam Computation of physical and chemical parameters
  • Xfam Database of similar molecular features
  • EXPASY Bioinformatics Resource Portal

Structure Determination, Validation and Visualisation

• • MolProbity Evaluation of structure determination
  • Diffraction Anisotropy Server Evaluation of directional dependence in diffraction quality
  • Cryo-EM @ Harvard Medical School
  • SBGrid consortium Computing ressources
  • East Quad NMR Facility
  • Bruker USA Bruker NMR website
  • Agilent Varian instruments